Tools & Research Resources

Curated scientific resources and bioinformatics utilities developed and maintained to support functional genomics research, non-model insect genomics, and reproducible data analysis.

Featured Resources

InsectDB – Non-Model Insect Sequence Database

A curated platform providing centralized access to protein and nucleotide sequence data for non-model insect species to support genomics and functional studies.

Technologies: R, Shiny, Python, BLAST, SQL

ICDB – Insect Cell Line Database

A public research resource compiling and organizing information on insect cell lines used in molecular biology, virology, and functional genomics research.

Focus: Cell line characterization, genomics applications

Primer Design Tool for Non-Model Insects

A web-based application for designing custom primers for non-model insect genomes. Supports sequence input, parameter control, and user-friendly output.

Technologies: Python, Flask, Gunicorn, NGINX, BioPython

Tissue-Specific Gene Expression Prediction Tool

A web-based platform for analyzing and predicting tissue-specific gene expression patterns from RNA-seq datasets. Supports CSV uploads, large-scale expression matrices, and automated tissue classification workflows for non-model insect species.

Technologies: Python, Streamlit, scikit-learn, NGINX, Linux

GitHub – Reproducible Bioinformatics Repositories

Open-source repositories supporting genomics workflows, pipeline automation, and educational examples for bioinformatics and insect genomics.

Focus: RNA-seq pipelines, HPC/SLURM scripts, analysis utilities